:orphan: Py eddy tracker toolbox ======================= All figures in this gallery, used an experimental dataset, compute with this dataset : cmems_product_. .. _cmems_product: https://resources.marine.copernicus.eu/?option=com_csw&task=results?option=com_csw&view=details&product_id=SEALEVEL_MED_PHY_L4_REP_OBSERVATIONS_008_051 .. raw:: html
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General features ================ .. raw:: html
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.. only:: html .. image:: /python_module/01_general_things/images/thumb/sphx_glr_pet_storage_thumb.png :alt: :ref:`sphx_glr_python_module_01_general_things_pet_storage.py` .. raw:: html
How data is stored
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Eddy detection ============== Method to detect eddies from grid and display, with various parameters. .. raw:: html
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_contour_circle_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_contour_circle.py` .. raw:: html
Display contour & circle
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_display_id_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_display_id.py` .. raw:: html
Display identification
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_radius_vs_area_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_radius_vs_area.py` .. raw:: html
Radius vs area
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_shape_gallery_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_shape_gallery.py` .. raw:: html
Shape error gallery
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_interp_grid_on_dataset_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_interp_grid_on_dataset.py` .. raw:: html
Get mean of grid in each eddies
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_statistics_on_identification_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_statistics_on_identification.py` .. raw:: html
Stastics on identification files
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_eddy_detection_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_eddy_detection.py` .. raw:: html
Eddy detection : Med
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_eddy_detection_gulf_stream_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_eddy_detection_gulf_stream.py` .. raw:: html
Eddy detection : Gulf stream
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_filter_and_detection_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_filter_and_detection.py` .. raw:: html
Eddy detection and filter
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_sla_and_adt_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_sla_and_adt.py` .. raw:: html
Eddy detection on SLA and ADT
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.. only:: html .. image:: /python_module/02_eddy_identification/images/thumb/sphx_glr_pet_eddy_detection_ACC_thumb.png :alt: :ref:`sphx_glr_python_module_02_eddy_identification_pet_eddy_detection_ACC.py` .. raw:: html
Eddy detection : Antartic Circumpolar Current
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Grid Manipulation ================= .. raw:: html
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.. only:: html .. image:: /python_module/06_grid_manipulation/images/thumb/sphx_glr_pet_hide_pixel_out_eddies_thumb.png :alt: :ref:`sphx_glr_python_module_06_grid_manipulation_pet_hide_pixel_out_eddies.py` .. raw:: html
Select pixel in eddies
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.. only:: html .. image:: /python_module/06_grid_manipulation/images/thumb/sphx_glr_pet_filter_thumb.png :alt: :ref:`sphx_glr_python_module_06_grid_manipulation_pet_filter.py` .. raw:: html
Grid filtering in PET
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.. only:: html .. image:: /python_module/06_grid_manipulation/images/thumb/sphx_glr_pet_lavd_thumb.png :alt: :ref:`sphx_glr_python_module_06_grid_manipulation_pet_lavd.py` .. raw:: html
LAVD experiment
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.. only:: html .. image:: /python_module/06_grid_manipulation/images/thumb/sphx_glr_pet_okubo_weiss_thumb.png :alt: :ref:`sphx_glr_python_module_06_grid_manipulation_pet_okubo_weiss.py` .. raw:: html
Get Okubo Weis
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.. only:: html .. image:: /python_module/06_grid_manipulation/images/thumb/sphx_glr_pet_advect_thumb.png :alt: :ref:`sphx_glr_python_module_06_grid_manipulation_pet_advect.py` .. raw:: html
Grid advection
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Time grid computation ===================== .. raw:: html
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.. only:: html .. image:: /python_module/07_cube_manipulation/images/thumb/sphx_glr_pet_particles_drift_thumb.png :alt: :ref:`sphx_glr_python_module_07_cube_manipulation_pet_particles_drift.py` .. raw:: html
Build path of particle drifting
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.. only:: html .. image:: /python_module/07_cube_manipulation/images/thumb/sphx_glr_pet_cube_thumb.png :alt: :ref:`sphx_glr_python_module_07_cube_manipulation_pet_cube.py` .. raw:: html
Time advection
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.. only:: html .. image:: /python_module/07_cube_manipulation/images/thumb/sphx_glr_pet_fsle_med_thumb.png :alt: :ref:`sphx_glr_python_module_07_cube_manipulation_pet_fsle_med.py` .. raw:: html
FSLE experiment in med
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.. only:: html .. image:: /python_module/07_cube_manipulation/images/thumb/sphx_glr_pet_lavd_detection_thumb.png :alt: :ref:`sphx_glr_python_module_07_cube_manipulation_pet_lavd_detection.py` .. raw:: html
LAVD detection and geometric detection
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Tracking Manipulation ===================== Method to subset and display atlas. .. raw:: html
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.. only:: html .. image:: /python_module/08_tracking_manipulation/images/thumb/sphx_glr_pet_track_anim_thumb.png :alt: :ref:`sphx_glr_python_module_08_tracking_manipulation_pet_track_anim.py` .. raw:: html
Track animation
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.. only:: html .. image:: /python_module/08_tracking_manipulation/images/thumb/sphx_glr_pet_display_field_thumb.png :alt: :ref:`sphx_glr_python_module_08_tracking_manipulation_pet_display_field.py` .. raw:: html
Display fields
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.. only:: html .. image:: /python_module/08_tracking_manipulation/images/thumb/sphx_glr_pet_select_track_across_area_thumb.png :alt: :ref:`sphx_glr_python_module_08_tracking_manipulation_pet_select_track_across_area.py` .. raw:: html
Tracks which go through area
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.. only:: html .. image:: /python_module/08_tracking_manipulation/images/thumb/sphx_glr_pet_display_track_thumb.png :alt: :ref:`sphx_glr_python_module_08_tracking_manipulation_pet_display_track.py` .. raw:: html
Display Tracks
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.. only:: html .. image:: /python_module/08_tracking_manipulation/images/thumb/sphx_glr_pet_one_track_thumb.png :alt: :ref:`sphx_glr_python_module_08_tracking_manipulation_pet_one_track.py` .. raw:: html
One Track
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.. only:: html .. image:: /python_module/08_tracking_manipulation/images/thumb/sphx_glr_pet_run_a_tracking_thumb.png :alt: :ref:`sphx_glr_python_module_08_tracking_manipulation_pet_run_a_tracking.py` .. raw:: html
Track in python
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.. only:: html .. image:: /python_module/08_tracking_manipulation/images/thumb/sphx_glr_pet_track_anim_matplotlib_animation_thumb.png :alt: :ref:`sphx_glr_python_module_08_tracking_manipulation_pet_track_anim_matplotlib_animation.py` .. raw:: html
Track animation with standard matplotlib
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.. only:: html .. image:: /python_module/08_tracking_manipulation/images/thumb/sphx_glr_pet_how_to_use_correspondances_thumb.png :alt: :ref:`sphx_glr_python_module_08_tracking_manipulation_pet_how_to_use_correspondances.py` .. raw:: html
Correspondances
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Tracking diagnostics ==================== Method to produce statistics with eddies atlas. .. raw:: html
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_geographic_stats_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_geographic_stats.py` .. raw:: html
Geographical statistics
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_birth_and_death_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_birth_and_death.py` .. raw:: html
Birth and death
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_lifetime_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_lifetime.py` .. raw:: html
Lifetime Histogram
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_histo_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_histo.py` .. raw:: html
Parameter Histogram
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_normalised_lifetime_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_normalised_lifetime.py` .. raw:: html
Normalised Eddy Lifetimes
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_groups_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_groups.py` .. raw:: html
Groups distribution
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_propagation_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_propagation.py` .. raw:: html
Propagation Histogram
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_pixel_used_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_pixel_used.py` .. raw:: html
Count pixel used
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.. only:: html .. image:: /python_module/10_tracking_diagnostics/images/thumb/sphx_glr_pet_center_count_thumb.png :alt: :ref:`sphx_glr_python_module_10_tracking_diagnostics_pet_center_count.py` .. raw:: html
Count center
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External data ============= Eddies comparison with external data .. raw:: html
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.. only:: html .. image:: /python_module/12_external_data/images/thumb/sphx_glr_pet_SST_collocation_thumb.png :alt: :ref:`sphx_glr_python_module_12_external_data_pet_SST_collocation.py` .. raw:: html
Collocating external data
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.. only:: html .. image:: /python_module/12_external_data/images/thumb/sphx_glr_pet_drifter_loopers_thumb.png :alt: :ref:`sphx_glr_python_module_12_external_data_pet_drifter_loopers.py` .. raw:: html
Colocate looper with eddy from altimetry
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Polygon tools ============= Method to work with contour .. raw:: html
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.. only:: html .. image:: /python_module/14_generic_tools/images/thumb/sphx_glr_pet_fit_contour_thumb.png :alt: :ref:`sphx_glr_python_module_14_generic_tools_pet_fit_contour.py` .. raw:: html
Contour fit
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.. only:: html .. image:: /python_module/14_generic_tools/images/thumb/sphx_glr_pet_visvalingam_thumb.gif :alt: :ref:`sphx_glr_python_module_14_generic_tools_pet_visvalingam.py` .. raw:: html
Visvalingam algorithm
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Network ======= .. warning:: Network is under development, API could move quickly! .. raw:: html
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.. only:: html .. image:: /python_module/16_network/images/thumb/sphx_glr_pet_segmentation_anim_thumb.png :alt: :ref:`sphx_glr_python_module_16_network_pet_segmentation_anim.py` .. raw:: html
Network segmentation process
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.. only:: html .. image:: /python_module/16_network/images/thumb/sphx_glr_pet_atlas_thumb.png :alt: :ref:`sphx_glr_python_module_16_network_pet_atlas.py` .. raw:: html
Network Analysis
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.. only:: html .. image:: /python_module/16_network/images/thumb/sphx_glr_pet_replay_segmentation_thumb.png :alt: :ref:`sphx_glr_python_module_16_network_pet_replay_segmentation.py` .. raw:: html
Replay segmentation
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.. only:: html .. image:: /python_module/16_network/images/thumb/sphx_glr_pet_group_anim_thumb.png :alt: :ref:`sphx_glr_python_module_16_network_pet_group_anim.py` .. raw:: html
Network group process
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.. only:: html .. image:: /python_module/16_network/images/thumb/sphx_glr_pet_follow_particle_thumb.png :alt: :ref:`sphx_glr_python_module_16_network_pet_follow_particle.py` .. raw:: html
Follow particle
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.. only:: html .. image:: /python_module/16_network/images/thumb/sphx_glr_pet_ioannou_2017_case_thumb.png :alt: :ref:`sphx_glr_python_module_16_network_pet_ioannou_2017_case.py` .. raw:: html
Ioannou case
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.. only:: html .. image:: /python_module/16_network/images/thumb/sphx_glr_pet_relative_thumb.png :alt: :ref:`sphx_glr_python_module_16_network_pet_relative.py` .. raw:: html
Network basic manipulation
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.. toctree:: :hidden: :includehidden: /python_module/01_general_things/index.rst /python_module/02_eddy_identification/index.rst /python_module/06_grid_manipulation/index.rst /python_module/07_cube_manipulation/index.rst /python_module/08_tracking_manipulation/index.rst /python_module/10_tracking_diagnostics/index.rst /python_module/12_external_data/index.rst /python_module/14_generic_tools/index.rst /python_module/16_network/index.rst .. only:: html .. container:: sphx-glr-footer sphx-glr-footer-gallery .. container:: sphx-glr-download sphx-glr-download-python :download:`Download all examples in Python source code: python_module_python.zip ` .. container:: sphx-glr-download sphx-glr-download-jupyter :download:`Download all examples in Jupyter notebooks: python_module_jupyter.zip ` .. only:: html .. rst-class:: sphx-glr-signature `Gallery generated by Sphinx-Gallery `_